For the linux environment. You have something slightly unusual going on. If the hard drive is an exact match as the original image, then partitions are not adjusted. Your hard drive is 200+ GB but for some reason your original partitions were only around 100GB. Since the drive is an exact match CloneDeploy just lays down the exact same partition table. Anyway, in your image profile deploy options just enable
Force Dynamic Partition For Exact Hdd Match
and that should take care of it.
Now the WinPE environment looks like I didn't code it properly. I'm not expanding the final partition to fill the rest of the drive. I'll need to add this to my list for 1.3.0. The WinPE environment is still in early stage of development, I think only a handful of people have even tried it, most use Linux.